BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022C10SP1|AL427882
(544 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1105 784 0.0
>3x_Contig1105
Length = 3123
Score = 784 bits (393), Expect = 0.0
Identities = 395/397 (99%)
Strand = Plus / Plus
Query: 1 gatcatacaattgctgttagaaaaggtattaatttaggtttcttattattcgtagtatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2720 gatcatacaattgctgttagaaaaggtattaatttaggtttcttattattcgtagtatca 2779
Query: 61 gaaattttaattttcgctgcattattctgagcttatttccattcagctatgagccctaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2780 gaaattttaattttcgctgcattattctgagcttatttccattcagctatgagccctaat 2839
Query: 121 attgaattaggtggtgtatgacctccagttggtattcaagctgtacaacctacagaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2840 attgaattaggtggtgtatgacctccagttggtattcaagctgtacaacctacagaatta 2899
Query: 181 cctttattaaatactattatcttattatcttcaggtgctactattacatatagtcatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2900 cctttattaaatactattatcttattatcttcaggtgctactattacatatagtcatcat 2959
Query: 241 ggattagtaggtggtaatagaaaavatgcattatcaggattattaattacattctgatta 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2960 ggattagtaggtggtaatagaaaaaatgcattatcaggattattaattacattctgatta 3019
Query: 301 attgttatttttgttacttgtcaatatatcgaatatactaatgctactttcacaattact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3020 attgttatttttgttacttgtcaatatatcgaatatactaatgctactttcacaattact 3079
Query: 361 gatggtgtatatggrtcagtattctatgctggtacag 397
|||||||||||||| ||||||||||||||||||||||
Sbjct: 3080 gatggtgtatatggatcagtattctatgctggtacag 3116
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3746
Number of Sequences: 1807
Number of extensions: 3746
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 544
length of database: 10,358,551
effective HSP length: 16
effective length of query: 528
effective length of database: 10,329,639
effective search space: 5454049392
effective search space used: 5454049392
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)